Imprinted Gene Databases

Imprinted Genes: by Species

Below are listings of genes by species, sorted by chromosomal location. Gene information has been gathered from NCBI, and some genes lack chromosomal coordinates; these are designated with ---. To switch species, select the appropriate tab. To view more information about a gene, click on its name. If there is a gene missing that you feel should be included in the catalog, please contact us.

Only display genes with imprint status:
Gene Aliases Location Status Expressed Allele
DIRAS3 ARHI, NOEY2  1:68501644-68526459 AS  Imprinted Paternal
RNU5D-1 U5DL, U5DS, RNU5D  1:45186740-45206839 AS  Imprinted Paternal
TP73 P73  1:3559128-3660466  Imprinted Maternal
LRRTM1   2:80519002-80541486 AS  Imprinted Paternal
ZDBF2   2:207129522-207189147  Imprinted Paternal
GPR1   2:207030039-207092770 AS  Imprinted Paternal
NAP1L5 DRLM  4:89607065-89629022 AS  Imprinted Paternal
ERAP2 LRAP, L-RAP  5:96865938-96929715  Imprinted Paternal
RHOBTB3   5:95703521-95806360  Imprinted Paternal
VTRNA2-1 CBL3, CBL-3, hvg-5, nc886, MIR886, VTRNA2, MIRN886, svtRNA2-1a, hsa-mir-886  5:136070497-136090596 AS  Imprinted Paternal
ADTRP AIG1L, C6orf105, dJ413H6.1  6:11703522-11789627 AS  Imprinted Maternal
FAM50B X5L, D6S2654E  6:3839397-3861316  Imprinted Paternal
PXDC1 C6orf145  6:3712603-3762296 AS  Imprinted Paternal
LIN28B CSDD2  6:105394922-105541206  Imprinted Paternal
AIM1 ST4, CRYBG1  6:106798682-107028334  Imprinted Paternal
PLAGL1 ZAC, LOT1, ZAC1, MGC126275, MGC126276, DKFZp781P1017  6:144251436-144395734 AS  Imprinted Paternal
HYMAI NCRNA00020  6:144314022-144339866 AS  Imprinted Paternal
SLC22A2* OCT2, MGC32628  6:160547779-160609948 AS  Imprinted Maternal
SLC22A3* EMT, EMTH, OCT3  6:160679414-160806003  Imprinted Maternal
GRB10 RSS, IRBP, MEG1, GRB-IR, Grb-10, KIAA0207  7:50647759-50871158 AS  Imprinted Isoform Dependent
DDC AADC  7:50516133-50643153 AS  Imprinted Isoform Dependent
GLI3 PHS, ACLS, GCPS, PAPA, PAPB, PAP-A, PAPA1, PPDIV  7:41990546-42286617 AS  Imprinted Paternal
HECW1 NEDL1  7:43102579-43576000  Imprinted Paternal
HOXA4 HOX1, HOX1D  7:27158125-27180398 AS  Imprinted Maternal
PEG10 EDR, HB-1, Mar2, MEF3L, Mart2, RGAG3  7:94275636-94309006  Imprinted Paternal
MAGI2 AIP1, AIP-1, ARIP1, SSCAM, MAGI-2, ACVRIP1  7:77636373-79092889 AS  Imprinted Maternal
SGCE ESG, DYT11  7:94204535-94295520 AS  Imprinted Paternal
PPP1R9A NRB1, NRBI, FLJ20068, KIAA1222, Neurabin-I  7:94526948-94935726  Imprinted Maternal
DLX5   7:96477643-96502078 AS  Imprinted Maternal
TFPI2 PP5, REF1, TFPI-2, FLJ21164  7:93505744-93530064 AS  Imprinted Maternal
CCDC71L C7orf74  7:106644359-106671157 AS  Imprinted Paternal
CPA4 CPA3  7:129922973-129974019  Imprinted Maternal
MEST PEG1, MGC8703, MGC111102, DKFZp686L18234  7:130116045-130156132  Imprinted Paternal
COPG2IT1 CIT1, COPG2AS, FLJ41646, NCRNA00170, DKFZP761N09121  7:29588128-29613035  Imprinted Paternal
MESTIT1 MEST-IT, PEG1-AS, MEST-AS1, MEST-IT1, NCRNA00040  7:130116897-130141012 AS  Imprinted Paternal
KLF14 BTEB5  7:130407477-130428859 AS  Imprinted Maternal
SVOPL   7:138581688-138711361 AS  Imprinted Maternal
DLGAP2 DAP2, SAPAP2  8:1439568-1666641  Imprinted Paternal
KCNK9 KT3.2, TASK3, K2p9.1, TASK-3, MGC138268, MGC138270  8:140614803-140725298 AS  Imprinted Maternal
PEG13   8q24.22  Imprinted Paternal
ZFAT-AS1 ZFATAS, ZFAT-AS, SAS-ZFAT, NCRNA00070  8:135600313-135622931  Imprinted Paternal
ZFAT AITD3, ZFAT1, ZNF406  8:135480030-135735291 AS  Imprinted Paternal
GLIS3 ZNF515  9:3814127-4310034 AS  Imprinted Paternal
INPP5F V2 SAC2, hSAC2, MSTP007, MSTPO47, FLJ13081, KIAA0966, MGC59773, MGC131851  10:121465598-121588648  Imprinted Paternal
WT1-AS WIT1, WIT-1, WT1AS, WT1-AS1  11:32425517-32468768  Imprinted Paternal
WT1 GUD, AWT1, WAGR, WT33, NPHS4, WIT-2, EWS-WT1  11:32377774-32445534 AS  Imprinted Paternal
KCNQ1OT1 LIT1, KvDMR1, KCNQ10T1, KvLQT1-AS, long QT intronic transcript 1  11p15  Imprinted Paternal
KCNQ1DN BWRT, HSA404617  11:2837868-2859910  Imprinted Maternal
OSBPL5 ORP5, OBPH1, FLJ42929  11:3098345-3196581 AS  Imprinted Maternal
PHLDA2 IPL, BRW1C, BWR1C, HLDA2, TSSC3  11:2939502-2960649 AS  Imprinted Maternal
CDKN1C BWS, WBS, p57, BWCR, KIP2  11:2894447-2916994 AS  Imprinted Maternal
IGF2 INSIGF, pp9974, C11orf43, FLJ22066, FLJ44734  11:2140346-2180832 AS  Imprinted Paternal
SLC22A18 HET, ITM, BWR1A, IMPT1, TSSC5, ORCTL2, BWSCR1A, SLC22A1L, p45-BWR1A, DKFZp667A184  11:2910950-2956475  Imprinted Maternal
IGF2AS PEG8, MGC168198  11:2151736-2179893  Imprinted Paternal
H19 ASM, BWS, ASM1, MGC4485, PRO2605, D11S813E  11:1962981-1985640 AS  Imprinted Maternal
INS ILPR, IRDN  11:2171008-2192438 AS  Imprinted Paternal
KCNQ1 LQT, RWS, WRS, LQT1, SQT2, ATFB1, ATFB3, JLNS1, KCNA8, KCNA9, Kv1.9, Kv7.1, KVLQT1, FLJ26167  11:2456220-2880339  Imprinted Maternal
ANO1 DOG1, TAOS2, ORAOV2, TMEM16A  11:69914407-70045650  Imprinted Maternal
ZC3H12C MCPIP3  11:109954086-110052565  Imprinted Paternal
NTM HNT, NTRI, IGLON2  11:131230370-132216715  Imprinted Maternal
ST8SIA1 GD3S, SIAT8, SIAT8A, SIAT8-A, ST8SiaI  12:22183390-22344706 AS  Imprinted Paternal
RBP5 CRBP3, CRBPIII, CRBP-III  12:7266279-7291465 AS  Imprinted Maternal
HNF1A HNF1, LFB1, TCF1, HNF4A, MODY3, TCF-1, HNF-1A, IDDM20  12:120967682-121012511  Imprinted
ATP5F1EP2 ATP5EP2  13:27935205-27955572  Imprinted Maternal
RB1 RB, pRb, OSRC, pp110, p105-Rb  13:48867882-49066025  Imprinted Maternal
ESR2 Erb, ESRB, ODG8, ESTRB, NR3A2, ER-BETA, ESR-BETA  14:64216706-64348630 AS  Imprinted
SMOC1 OAS  14:69869387-70042365  Imprinted Maternal
DIO3 D3, 5DIII, TXDI3, DIOIII  14:102017687-102039788  Imprinted Paternal
MEG3 GTL2, FP504, prebp1, PRO0518, PRO2160, FLJ31163, FLJ42589  14:100352214-100407118  Imprinted Maternal
DLK1 DLK, FA1, ZOG, pG2, DLK-1, PREF1, Delta1, Pref-1  14:100716891-100748223  Imprinted Paternal
MEG8 Bsr, Irm, Rian, SNHG23, SNHG24, lnc-MGC, LINC00024, NCRNA00024  14:100879648-101009112  Imprinted Maternal
SNORD114-1 14q(II-1)  14:100939832-100959902  Imprinted Maternal
DIO3OS DIO3-OS, DIO3-AS1, C14orf134, NCRNA00041  14:101542220-101570421 AS  Imprinted Maternal
SNORD113-1 14q(I-1)  14:100914820-100934889  Imprinted Maternal
RTL1 MART1, PEG11, LOC388015  14:100406801-100430877 AS  Imprinted Paternal
MAGEL2 nM15, NDNL1  15:23878695-23901174 AS  Imprinted Paternal
MKRN3 D15S9, RNF63, ZFP127, ZNF127, MGC88288  15:23800453-23823166  Imprinted Paternal
UBE3A AS, ANCR, E6-AP, HPVE6A, EPVE6AP, FLJ26981  15:25572395-25694127 AS  Imprinted Maternal
SNORD115@ HBII-52  15:25405869-25525004  Imprinted Paternal
SNORD116 PET1, PWCR1, HBII-85  15:25286622-25361749  Imprinted Paternal
SNORD109A HBII-438A  15:25277120-25297186  Imprinted Paternal
SNORD108 HBII-437, HBII-437 C/D box snoRNA  15:22773164-22793232  Imprinted Paternal
SNORD115-48 HBII-52-48  15:25504929-25525004  Imprinted Paternal
ATP10A ATPVA, ATPVC, ATP10C, KIAA0566  15:25913858-26118348 AS  Imprinted Maternal
SNORD107 HBII-436, HBII-436 C/D box snoRNA  15:22768233-22788307  Imprinted Paternal
SNORD109B HBII-438B, HBII-438B C/D box snoRNA  15:23064582-23084648  Imprinted Paternal
NPAP1 C15orf2  15:24665774-24693392  Imprinted Paternal
SNRPN SMN, PWCR, SM-D, RT-LI, HCERN3, SNRNP-N, FLJ33569, FLJ36996, FLJ39265, MGC29886, SNURF-SNRPN, DKFZp762N022, DKFZp686C0927, DKFZp761I1912, DKFZp686M12165  15:25058793-25674608  Imprinted Paternal
PWCR1 PET1, non-coding RNA in the Prader-Willi critical region  15:260567-280661  Imprinted Paternal
PWAR6 HBT8, PAR-6  15:25021872-25046489  Imprinted Paternal
NDN HsT16328  15:21471646-21493542 AS  Imprinted Paternal
SNURF   15:22741227-22784821  Imprinted Paternal
SNORD64 HBII-13, HBII-13 snoRNA  15:22771339-22791405  Imprinted Paternal
RASGRF1 GNRP, GRF1, CDC25, GRF55, CDC25L, H-GRF55, PP13187  15:79242288-79393214 AS  Imprinted Paternal
IRAIN IGF1R-AS  15:-8669-16689 AS  Imprinted Paternal
ZNF597   16:3476109-3503489 AS  Imprinted Maternal
NAA60 HAT4, NAT15  16:3483667-3546962  Imprinted Maternal
CMTM1 CKLFH, CKLFH1, CKLFSF1  16:66556438-66589134  Imprinted Paternal
ZFP90 FIK, NK10, ZNF756, zfp-90  16:68520248-68586071  Imprinted Paternal
TP53 P53, BCC7, LFS1, TRP53  17:7658401-7697549 AS  Imprinted
ZNF396 ZSCAN14  18:35356693-35387336 AS  Imprinted Paternal
TCEB3C HsT829, TCEB3L2, Elongin A3  18:44544572-44566448 AS  Imprinted Maternal
DNMT1 AIM, DNMT, MCMT, CXXC9, HSN1E, ADCADN  19:10234020-10315782 AS  Imprinted Paternal
ZIM2 ZNF656  19:57275919-57362074 AS  Imprinted Paternal
MIMT1 MIM1, LINC00067, NCRNA00067  19:57342269-57369921  Imprinted Paternal
PEG3 PW1, ZNF904, ZSCAN24  19:57311444-57362093 AS  Imprinted Paternal
MIR371A C19MC, MIR371, MIRN371, hsa-mir-371, hsa-mir-371a  19:54280928-54300994  Imprinted Paternal
NLRP2 NBS1, PAN1, NALP2, PYPAF2, CLR19.9  19:55466651-55522509  Imprinted Maternal
PEG3-AS1 APEG3, PEG3AS, PEG3-AS, NCRNA00155  19:56802479-56823792  Imprinted Paternal
PSIMCT-1   20:30125184-30146022  Imprinted Paternal
BLCAP BC10  20:36135818-36166302 AS  Imprinted Isoform Dependent
NNAT Peg5  20:36139606-36162091  Imprinted Paternal
MCTS2   20q11.21  Imprinted Paternal
GDAP1L1 dJ881L22.1, dJ995J12.1.1  20:44237098-44290916  Imprinted Paternal
SGK2 H-SGK2, dJ138B7.2  20:43548994-43595632  Imprinted Paternal
GNAS AHO, GSA, GSP, POH, GPSA, NESP, GNAS1, PHP1A, PHP1B, C20orf45, MGC33735, dJ309F20.1.1, dJ806M20.3.3  20:57404794-57496249  Imprinted Isoform Dependent
L3MBTL1 L3MBTL, ZC2HC3, H-L(3)MBT, dJ138B7.3  20:43497696-43560953  Imprinted Paternal
SANG SANG, Nespas  20q13.32  Imprinted Paternal
GNASAS SANG, NESPAS, GNAS1AS, NCRNA00075  20:57383972-57435957 AS  Imprinted Paternal
MIR298 MIRN298, hsa-mir-298  20:57383280-57403367 AS  Imprinted Paternal
MIR296 MIRN296, miRNA296  20:57382669-57402748 AS  Imprinted Paternal
DSCAM CHD2, CHD2-42, CHD2-52  21:40000998-40857157 AS  Imprinted Paternal
DGCR6   22:18896222-18922087  Imprinted Random
DGCR6L   22:20304237-20330104 AS  Imprinted Random