Imprinted Genes: by Species
Below are listings of genes by species, sorted by chromosomal location. Gene information has been gathered from NCBI, and some genes lack chromosomal coordinates; these are designated with ---. To switch species, select the appropriate tab. To view more information about a gene, click on its name. If there is a gene missing that you feel should be included in the catalog, please contact us.
Only display genes with imprint status:| Gene | Aliases | Location | Status | Expressed Allele |
|---|---|---|---|---|
| Wt1 | Wt-1, D630046I19Rik | 2:104917367-104984450 (2 58.0 cM) | Unknown | Unknown |
| Gatm | AT, AI314789, 1810003P21Rik | 2:122275912-122312702 AS (2 69.0 cM) | Imprinted | Maternal |
| Blcap | Bc10, AI462828, MGC102074 | 2:157372097-157402096 AS (2 88.0 cM) | Imprinted | Isoform Dependent |
| Nnat | Peg5, AW107673, 5730414I02Rik | 2:157375845-157398257 (2 88.0 cM) | Imprinted | Paternal |
| L3mbtl | L3MBTL1, KIAA0681, mKIAA0681, C630004G01 | 2:162624905-162675962 (2 H2) | Unknown | Unknown |
| Nespas | Gnas-as, Sang | 2:173914175-173948374 AS (2 104.0 cM) | Imprinted | Maternal |
| Gnas | P1, P2, P3, GSP, Gsa, POH, GPSA, Nesp, Gnas1, Nespl, PHP1A, PHP1B, Gnasxl, Nesp55, Oedsml, Oed-Sml, Gs-alpha, XLalphas, MGC118029, 5530400H20Rik, A930027G11Rik, C130027O20Rik | 2:173917259-173999682 (2 104.0 cM) | Imprinted | Isoform Dependent |
| Ngfb | 3:102263850-102334927 (3 48.5 cM) | Predicted | Paternal | |
| Gnai3 | Gnai-3, AI158965, AW537698 | 3:108225354-108284169 AS (3 48.8 cM) | Predicted | Maternal |
| Trp73 | p73, TP73 | 4:152892643-152994007 AS (4 82.0 cM) | Unknown | Unknown |
| Mkrn1-ps1 | makorin, ring finger protein 1, pseudogene 1 | 5:89902715-89923906 AS (5 E1) | Imprinted | Paternal |
| Calcr | Clr | 6:3625733-3728615 AS (6 3.8 cM) | Imprinted | Maternal |
| Tfpi2 | AV000670, PP5/TFPI-2 | 6:3902594-3928353 AS (6 1.0 cM) | Imprinted | Maternal |
| Sgce | e-SG | 6:4614349-4707098 AS (6 1.0 cM) | Imprinted | Paternal |
| Peg10 | Edr, HB-1, Mar2, MEF3L, Mart2, MyEF-3, AA407948 | 6:4687379-4720475 (6 0.5 cM) | Imprinted | Paternal |
| Ppp1r9a | BB181831, mKIAA1222, 5330407E15, neurabin-I, 2810430P21Rik, 4930518N04Rik, A230094E16Rik | 6:4843319-5125660 (6 0.5 cM) | Imprinted | Maternal |
| Pon1 | Pon | 6:5108104-5153823 AS (6 0.5 cM) | Not Imprinted | Biallelic |
| Pon3 | AI786302, 2810004E20 | 6:5160851-5216232 AS (6 0.5 cM) | Provisional Data | Maternal |
| Pon2 | AI481612, MGC68232, 6330405I24Rik | 6:5204623-5258372 AS (6 A1) | Provisional Data | Maternal |
| Asb4 | AV117194, AW060255, 8430401O13Rik | 6:5323385-5393021 (6 0.6 cM) | Imprinted | Maternal |
| Dlx5 | AI385752 | 6:6817804-6842067 AS (6 2.0 cM) | Not Imprinted | Biallelic |
| Cpa4 | AV009555, 1110019K20Rik | 6:30508385-30551756 (6 A3.3) | Unknown | Unknown |
| Mest | Peg1, AA408879, AI256745 | 6:30678072-30708466 (6 7.5 cM) | Imprinted | Paternal |
| Copg2 | AW227625 | 6:30729597-30836920 AS (6 A3.3) | Imprinted | Maternal |
| Klf14 | BTEB5, AL022736, 5330411L03Rik | 6:30897682-30918981 AS (6 A3.3) | Imprinted | Maternal |
| Nap1l5 | 1110020M21Rik | 6:58824811-58846642 AS (6 C1) | Imprinted | Paternal |
| Igf2as | --- (7 69.09 cM) | Imprinted | Paternal | |
| Zfp264 | --- (7 7.0 cM) | Imprinted | Paternal | |
| Zfp127as | ZNF127AS | --- (7 29.0 cM) | Imprinted | Maternal |
| Zim3 | 1700128I23Rik | --- (7 7.0 cM) | Imprinted | Maternal |
| AF313042 | Msuit1 | --- (7 69.5 cM) | Imprinted | Maternal |
| Kcnq1ot1 | Lit1, Kvlqt1-as, antisense transcript of Kvlqt1 | 7:474882-579156 (7 69.3 cM) | Imprinted | Paternal |
| Zim2 | 1700116N21Rik | 7:6245833-6276491 AS (7 A1) | Imprinted | Maternal |
| Zim1 | 7:6269528-6310517 AS (7 6.5 cM) | Imprinted | Maternal | |
| Peg3 | Pw1, End4, Gcap4, Zfp102, AL022617, mKIAA0287 | 7:6300045-6344504 AS (7 6.5 cM) | Imprinted | Paternal |
| Usp29 | Ocat | 7:6324668-6581301 (7 6.5 cM) | Imprinted | Paternal |
| Gabrg3 | Gabrg-3 | 7:56582260-57264816 AS (7 28.2 cM) | Unknown | Unknown |
| Gabra5 | A230018I05Rik | 7:57265687-57387872 AS (7 28.5 cM) | Unknown | Unknown |
| Gabrb3 | Cp1, Gabrb-3, AW049585, A230092K12Rik | 7:57448397-57706665 (7 28.6 cM) | Unknown | Unknown |
| Atp10a | pfatp, Atp10c | 7:58516200-58706659 (7 B5) | Conflicting Data | Maternal |
| Ube3a | Hpve6a, KIAA4216, mKIAA4216, 4732496B02, 5830462N02Rik, A130086L21Rik | 7:59086618-59184595 (7 28.65 cM) | Imprinted | Maternal |
| Pwcr1 | snoRNA MBII-85 | 7:59533858-59553947 AS (7 29.0 cM) | Imprinted | Paternal |
| Snrpn | SMN, Peg4, HCERN3, MGC18604, MGC30325, 2410045I01Rik | 7:59852063-59894053 AS (7 29.0 cM) | Imprinted | Paternal |
| Snurf | Snrpn, MGC18604, MGC30325, 2410045I01Rik | 7:59857551-59894073 AS (7 B5) | Imprinted | Paternal |
| Ndn | Peg6, AI528698 | 7:62217297-62238877 (7 28.0 cM) | Imprinted | Paternal |
| Magel2 | ns7, nM15, NDNL1, Mage-l2 | 7:62245928-62270589 (7 28.0 cM) | Imprinted | Paternal |
| Mkrn3 | Zfp127, D7H15S9-1 | 7:62286542-62309088 AS (7 29.0 cM) | Imprinted | Paternal |
| Peg12 | Frat3 | 7:62330820-62353459 AS (7 28.0 cM) | Imprinted | Paternal |
| Inpp5f | SAC2, cI-27, AI115354, AW561896, mKIAA0966, 5830435P03Rik | 7:135744878-135849949 (7 F3) | Imprinted | |
| H19 | 7:142374921-142397535 AS (7 69.03 cM) | Imprinted | Maternal | |
| Igf2 | Mpr, M6pr, Peg2, Igf-2, Igf-II, AL033362 | 7:142450157-142478878 AS (7 69.09 cM) | Imprinted | Paternal |
| Ins2 | Mody, Ins-2, Mody4, AA986540, proinsulin, INS | 7:142478050-142499097 AS (7 69.1 cM) | Imprinted | Paternal |
| Ascl2 | Mash2, 2410083I15Rik | 7:142766215-142788616 AS (7 69.3 cM) | Imprinted | Maternal |
| Tspan32 | Art-1, Phemx, Tssc6, AW208513, BB235973, D7Wsu37e | 7:142805080-142839033 (7 69.0 cM) | Imprinted | Maternal |
| Cd81 | Tapa1, Tapa-1, Tspan28 | 7:142852184-142887313 (7 69.3 cM) | Imprinted | Maternal |
| Tssc4 | AA241958, ESTM671070 | 7:142868757-142890476 (7 69.3 cM) | Imprinted | Maternal |
| Trpm5 | Mtr1, Ltrpc5, 9430099A16Rik | 7:142871181-142908997 AS (7 F5) | Not Imprinted | Biallelic |
| Kcnq1 | Kcna9, KVLQT1, AW559127 | 7:142906643-143246431 (7 69.3 cM) | Imprinted | Maternal |
| Cdkn1c | CDKI, Kip2, p57Kip2, AL024410, p57(kip2) | 7:143257729-143280385 AS (7 69.49 cM) | Imprinted | Maternal |
| Slc22a18 | HET, ITM, BWR1A, Impt1, TSSC5, Orctl2, BWSCR1A, AW260131, Slc22a1l, p45-BWR1A | 7:143273178-143318711 (7 69.5 cM) | Imprinted | Maternal |
| Phlda2 | Ipl, Tssc3 | 7:143300937-143321913 AS (7 69.5 cM) | Imprinted | Maternal |
| Nap1l4 | Nap2, AI316776, D7Wsu30e, 2810410H14Rik | 7:143312968-143368479 AS (7 69.55 cM) | Imprinted | Maternal |
| Tnfrsf23 | mSOB, Tnfrh1, Dctrailr1, MGC123882, MGC123883, Tnfrsf1al1, mDcTrailr1 | 7:143465196-143505261 AS (7 69.56 cM) | Imprinted | Maternal |
| Osbpl5 | ORP5, Obph1, Osbp2, AI462538, 1110006M06Rik | 7:143488151-143561352 AS (7 69.59 cM) | Imprinted | Maternal |
| Sdhd | C78570, AVLL5809, PRO19626, 3110001M13Rik | 9:50338575-50366046 AS (9 B) | Unknown | Unknown |
| Rasgrf1 | Grf1, p190, CDC25, P190-A, CDC25Mm, Grfbeta, Ras-GRF1, p190RhoGEF | 9:89697667-89837693 (9 50.0 cM) | Imprinted | Paternal |
| Plagl1 | Lot1, Zac1 | 10:12771106-12830085 (10 15.0 cM) | Imprinted | Paternal |
| Ctnna3 | Vr22, Catna3, 4933408A16 | 10:62815454-64408298 (10 B4-B5.1) | Unknown | Unknown |
| Dcn | DC, PG40, PGII, PGS2, mDcn, DSPG2, SLRR1B | 10:96902054-96957838 (10 55.0 cM) | Imprinted | Maternal |
| Ddc | Aadc | 11:11704105-11800403 AS (11 7.0 cM) | Imprinted | Paternal |
| Grb10 | Meg1, AI325020, mKIAA0207, 5730571D09Rik | 11:11820510-11947357 AS (11 8.0 cM) | Imprinted | Isoform Dependent |
| Commd1 | Murr1, U2/Mu, AI256843 | 11:22789727-22892283 AS (11 12.0 cM) | Imprinted | Maternal |
| U2af1-rs1 | SP2, 35kDa, Irlgs2, D11Ncvs75, U2afbp-rs | 11:22862036-22884907 (11 12.0 cM) | Imprinted | Paternal |
| Mirg | Meg9, AI852992, 2810474H01Rik | --- (12 F1) | Imprinted | Maternal |
| Rian | Meg8, 5530401N18Rik | --- (12 54.5 cM) | Imprinted | Maternal |
| Mirn337 | mmu-mir-337, mir 337 | 12:67567230-67587326 () | Imprinted | Maternal |
| Dlk1 | FA1, ZOG, pG2, Peg9, SCP1, Ly107, pref-1, AW742678 | 12:109891029-109918497 (12 54.0 cM) | Imprinted | Paternal |
| Gtl2 | Meg3, R74756, R75394, AI425946, AW108224, D12Bwg1266e, 2900016C05Rik, 3110050O07Rik, 6330408G06Rik | 12:109983424-110019518 (12 54.0 cM) | Imprinted | Maternal |
| Rtl1 | Mar, Mor1, Mart1, 6430411K18Rik | 12:110027975-110053209 AS (12 F1) | Imprinted | Paternal |
| Begain | Gm897, BM948371 | 12:110260391-110316426 AS (12 F1) | Imprinted | Isoform Dependent |
| Dio3 | MGC124117, MGC124118 | 12:110717039-110738901 (12 F1) | Imprinted | Paternal |
| Htr2a | Htr2, Htr-2, MGC124301, MGC124302, E030013E04 | 14:73364994-73451013 (14 41.5 cM) | Imprinted | Maternal |
| Kcnk9 | Task3 | 15:72332548-72386708 AS (15 D3) | Imprinted | Maternal |
| Peg13 | 15:72622855-72647579 AS (15 D3) | Imprinted | Paternal | |
| Slc38a4 | Ata3, mATA3, 1110012E16Rik, 1700012A18Rik | 15:96812856-96893989 AS (15 F1) | Imprinted | Paternal |
| Slc22a3 | EMT, Oct3, Orct3, Slca22a3 | 17:12253329-12361061 AS (17 7.31 cM) | Imprinted | Maternal |
| Slc22a2 | Oct2, Orct2, MGC18339 | 17:12417546-12481845 (17 7.32 cM) | Imprinted | Maternal |
| Igf2r | CD222, CI-MPR, Mpr300, AI661837, M6P/IGF2R | 17:12515770-12623021 AS (17 7.35 cM) | Imprinted | Maternal |
| Air | B930018I07Rik | 17:12581652-12605350 (17 7.36 cM) | Imprinted | Paternal |
| Impact | E430016J11Rik | 18:13105420-13146116 (18 A2-B2) | Imprinted | Paternal |
| Ins1 | Ins-1, Ins2-rs1 | 19:52307761-52328342 (19 49.0 cM) | Conflicting Data | Paternal |
| Tsix | antisense of Xist | X:99624235-99697675 (X 42.0 cM) | Imprinted | Maternal |
| Xist | A430022B11 | X:99653091-99695951 AS (X D) | Imprinted | Paternal |
